Commits · 6488faa04fa1ea2fed5b379569bed5b7c6219929 · Christian Tischer / platy-browser-data · GitLab

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Aug 15, 2019
- Refactor update_patch to account for new data management · 6488faa0
  Constantin Pape authored 5 years ago
  
  6488faa0
- add_segmentation is working for dynamic segmentations and added existing dynamic segmentations · 881918f9
  Constantin Pape authored 5 years ago
  
  881918f9
- add_segmentation is working for static segmentation and added existing static segmentations · e62eb491
  Constantin Pape authored 5 years ago
  
  e62eb491
- add_image is working and added all existing image data · c943b07f
  Constantin Pape authored 5 years ago
  
  c943b07f
- Implement mechanism to add new image data and start retrofitting the existing data · 083d67bd
  Constantin Pape authored 5 years ago
  
  083d67bd
Aug 13, 2019
- Prepare for new data source scheme · 36bb50bb
  Constantin Pape authored 5 years ago
  
  36bb50bb
- Update source logic · af3f3d65
  Constantin Pape authored 5 years ago
  
  af3f3d65
- Add mechanism to change default config values and change conda env · a83a430c
  Constantin Pape authored 5 years ago
  
  a83a430c
Aug 12, 2019
- Add DS_Store to the gitignore · abdbc59e
  Constantin Pape authored 5 years ago
  
  abdbc59e
Aug 07, 2019
- Merge branch 'dev' · e4ca9b90
  Constantin Pape authored 5 years ago
  
  e4ca9b90
Aug 06, 2019
- Update bdv server script · 85c5fc38
  Constantin Pape authored 5 years ago
  
  85c5fc38
- Add scripts for swapping links with original data folder · d2e267fa
  Constantin Pape authored 5 years ago
  
  d2e267fa
Jul 14, 2019
- Fix chromatin default table name · b0d38851
  Constantin Pape authored 5 years ago
  
  b0d38851
- Fix some issues in morphology refactor and tests · 81e9a4c9
  Constantin Pape authored 5 years ago
  
  81e9a4c9
- Refactor morphology feature implementation in separate file · 7fe3e58d
  Constantin Pape authored 5 years ago
  
  7fe3e58d
Jul 11, 2019
- Fix issues in segmentation id mapping · 122d78b0
  Constantin Pape authored 5 years ago
  
  122d78b0
- Automatic platy-browser update · 3606db21
  Constantin Pape authored 5 years ago
  
  0.2.1
  
  3606db21
Jul 10, 2019
- Working version of subvolume extraction · 7fe70128
  Constantin Pape authored 5 years ago
  
  7fe70128
- Add chromatin data · 3bbef304
  Constantin Pape authored 5 years ago
  
  0.2.0
  
  3bbef304
- Add chromatin segmentation to data · 4bc50d05
  Constantin Pape authored 5 years ago
  
  4bc50d05
Jul 09, 2019
- Start to implement subvolume extraction WIP · 28f13eb2
  Constantin Pape authored 5 years ago
  
  28f13eb2
- Update nucleus mapping test · ac241ce3
  Constantin Pape authored 5 years ago
  
  ac241ce3
- Add cell count script · 1ab5d8d1
  Constantin Pape authored 5 years ago
  
  1ab5d8d1
- Switch nucleus table in latest release · ee1bc067
  Constantin Pape authored 5 years ago
  
  ee1bc067
- Update nucleus mapping script · e0c42e4e
  Constantin Pape authored 5 years ago
  
  e0c42e4e
- Update region attribute tests · f2356faa
  Constantin Pape authored 5 years ago
  
  f2356faa
Jul 08, 2019
- Fix region table in latest release · 77f6442f
  Constantin Pape authored 5 years ago
  
  77f6442f
- Add script for legacy platy-browser export · 31618e5c
  Constantin Pape authored 5 years ago
  
  31618e5c
- Update prospr segmented regions · a082f5b6
  Constantin Pape authored 5 years ago
  
  a082f5b6
- Automatic platy browser update · b336445d
  Constantin Pape authored 5 years ago
  
  0.1.1
  
  b336445d
Jul 07, 2019
- Add cilia segmentation data · b92f1e23
  Constantin Pape authored 5 years ago
  
  0.1.0
  
  b92f1e23
- Copy segment id lut when copying segmentation xml · d9a5b411
  Constantin Pape authored 5 years ago
  
  d9a5b411
Jul 06, 2019
- Add export scripts for cilia segmentation · f634feca
  Constantin Pape authored 5 years ago
  
  f634feca
- Automatic platy browser update · 9ca8db04
  Constantin Pape authored 5 years ago
  
  0.0.1
  
  9ca8db04
- Add scripts to copy tables · 72dfb368
  Constantin Pape authored 5 years ago
  
  72dfb368
Jun 30, 2019
- Implement anchor correction · 1c8e755e
  Constantin Pape authored 5 years ago
  
  1c8e755e
- Fix several issues in update_platy_browser · 886241a6
  Constantin Pape authored 5 years ago
  
  886241a6
Jun 29, 2019
- Restrict numpy threads for morphology extraction · 33bcbdb4
  Constantin Pape authored 5 years ago
  
  33bcbdb4
Jun 27, 2019
- Merge branch 'dev' of https://git.embl.de/tischer/platy-browser-tables into dev · 950f116b
  Constantin Pape authored 5 years ago
  
  0.0.0
  
  950f116b
- Add segmented prospr regions to region attributes and adapt muscle mapping · 4816b25e
  Constantin Pape authored 5 years ago
  
  4816b25e