Skip to content
Snippets Groups Projects
Commit 61d4f9eb authored by Sascha Meiers's avatar Sascha Meiers
Browse files

Fixing Dockerfile

parent 4d2784aa
No related branches found
No related tags found
No related merge requests found
......@@ -23,6 +23,8 @@ RUN apt-get update \
libboost-iostreams1.62-dev \
libboost-date-time1.62.0 \
libboost-date-time1.62-dev \
zlib1g-dev \
libxml2-dev \
gawk \
bcftools=1.3.1-1+b1 \
samtools=1.3.1-3 \
......@@ -52,9 +54,7 @@ RUN Rscript -e "source('http://bioconductor.org/biocLite.R'); \
# Install MosaiCatcher (and clean up afterwards)
RUN apt-get update \
&& BUILD_DEPS="cmake \
git \
zlib1g-dev \
libxml2-dev" \
git" \
&& apt-get install --no-install-recommends -y $BUILD_DEPS \
&& git clone https://github.com/friendsofstrandseq/mosaicatcher.git \
&& cd mosaicatcher \
......@@ -65,4 +65,6 @@ RUN apt-get update \
&& cmake --build . \
&& cd \
&& ln -s /mosaicatcher/build/mosaic /usr/local/sbin/mosaic \
&& apt-get remove -y $BUILD_DEPS \
&& apt-get autoremove -y \
&& rm -rf /var/lib/apt/lists/*
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment