Commits · 387fc64ae3e133c351997f726d355a19dcb2fd60 · Thomas Weber / Mosaicatcher Update · GitLab

Snippets Groups Projects

Jun 22, 2019
- Tiny single bracket misplacement caused this script to fail on single chromosome datasets · 387fc64a
  Sascha Meiers authored 5 years ago
  
  387fc64a
May 09, 2019
- Add files via upload · e7e630d3
  jeongdo801 authored 5 years ago
  
  Unverified
  
  e7e630d3
- Delete bin_200kb_all.bed · 8efcf458
  jeongdo801 authored 5 years ago
  
  Unverified
  
  8efcf458
Mar 11, 2019
- Added section on system requirements · 20da4b00
  Sascha Meiers authored 6 years ago
  
  20da4b00
Mar 10, 2019
- small improvements on docs · de0c4855
  Sascha Meiers authored 6 years ago
  
  de0c4855
- Added yet another way to run the pipeline · 1027875f
  Sascha Meiers authored 6 years ago
  
  1027875f
Mar 09, 2019
- Add new Dockerfile so it can be build on docker hub · 2548306b
  Sascha Meiers authored 6 years ago
  
  2548306b
- state in Docs to use parallelism · dbc7f0db
  Sascha Meiers authored 6 years ago
  
  dbc7f0db
- for now, remove the note on 'Docker with own data' until the image is ready · 5875718e
  Sascha Meiers authored 6 years ago
  
  5875718e
- further README updates · 30671d14
  Sascha Meiers authored 6 years ago
  
  30671d14
- more README updates · a3d7d952
  Sascha Meiers authored 6 years ago
  
  a3d7d952
- README improvements · 598a5d91
  Sascha Meiers authored 6 years ago
  
  598a5d91
Jan 03, 2019
- Remove note that Docker image is not yet available · 4a0afd4c
  Sascha Meiers authored 6 years ago
  
  Unverified
  
  4a0afd4c
Dec 19, 2018
- Further README improvements · 05af7509
  Sascha Meiers authored 6 years ago
  
  05af7509
- Put WARNING that image is currently not fully working · bfee4765
  Sascha Meiers authored 6 years ago
  
  bfee4765
- Set path to SNV call set within RPE Dockerfile · bed88126
  Sascha Meiers authored 6 years ago
  
  bed88126
- Overwrite config['snv_sites_to_genotype'] to avoid error. This breaks the RPE-1 Docker image · d5f9e526
  Sascha Meiers authored 6 years ago
  
  d5f9e526
- use singularity version latest · db5c5d91
  Sascha Meiers authored 6 years ago
  
  db5c5d91
- Added warning if snv_sites_file does not exist · 8b4b6c4f
  Sascha Meiers authored 6 years ago
  
  8b4b6c4f
Dec 16, 2018
- updated README · a3a210ba
  Sascha Meiers authored 6 years ago
  
  a3a210ba
- Added preferred mosaicatcher version for manual installation · f6197200
  Sascha Meiers authored 6 years ago
  
  f6197200
- Changed wording in README · 9a8cf495
  Sascha Meiers authored 6 years ago
  
  9a8cf495
Dec 15, 2018
- Re-wrote parts of the README. Also made the logo smaller · d2a2abc0
  Sascha Meiers authored 6 years ago
  
  d2a2abc0
- Remove under construction note. Also restructure text · 585c0d98
  Sascha Meiers authored 6 years ago
  
  585c0d98
Dec 11, 2018
- Disclaimer: could not yet build the image (need fast internet for that) · 181b53d4
  Sascha Meiers authored 6 years ago
  
  181b53d4
- Explanations to the Docker image · 9f788321
  Sascha Meiers authored 6 years ago
  
  9f788321
- Preparing documentation for the RPE-1 Docker container · 71130e87
  Sascha Meiers authored 6 years ago
  
  71130e87
- Fixing issue with wrong timestamps in RPE-1 Docker image · d66e232a
  Sascha Meiers authored 6 years ago
  
  d66e232a
- more explanation will come soon · 1cecd14d
  Sascha Meiers authored 6 years ago
  
  1cecd14d
- Added final data pieces to Dockerfile. This image is so big, however, that I... · 425b1621
  Sascha Meiers authored 6 years ago
  
  Added final data pieces to Dockerfile. This image is so big, however, that I need time to push it to Dockerhub
  425b1621
Dec 10, 2018
- README updates · 28a74d93
  Sascha Meiers authored 6 years ago
  
  28a74d93
- moving Bioconda instructions to separate README · c60bda9b
  Sascha Meiers authored 6 years ago
  
  c60bda9b
- Bug fix in Dockerfile · 403b672d
  Sascha Meiers authored 6 years ago
  
  403b672d
Dec 09, 2018
- bug fix · 7983987a
  Sascha Meiers authored 6 years ago
  
  7983987a
- fix hardcoded file path · 4f5e824f
  Sascha Meiers authored 6 years ago
  
  4f5e824f
- Dockerfile containing all data for RPE-1. Needs further testing · cfe9624c
  Sascha Meiers authored 6 years ago
  
  cfe9624c
Dec 08, 2018
- switching to master branch (to be continued) · 31d6b5e0
  Sascha Meiers authored 6 years ago
  
  31d6b5e0
- Merging dev branch including docker image. Will update README soon · b54461d8
  Sascha Meiers authored 6 years ago
  
  b54461d8
- Merge branch 'master' into dev · 38e4481e
  Sascha Meiers authored 6 years ago
  
  38e4481e
- moved Dockerfile for RPE1 2 · 8a69ee29
  Sascha Meiers authored 6 years ago
  
  8a69ee29