Commits · c217146aecfd6c4cf4421ae0008b8b25194f4cf1 · Thomas Weber / Mosaicatcher Update · GitLab

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Jan 12, 2018
- Added rules for simulating counts · c217146a
  Tobias Marschall authored 7 years ago
  
  c217146a
Jan 11, 2018
- Remove sample name from config · 93e64c21
  Sascha Meiers authored 7 years ago
  
  Unverified
  
  93e64c21
- Chromosomes are now specified within the config file. Exclude file is auto-generated · d3008a55
  Sascha Meiers authored 7 years ago
  
  d3008a55
Jan 10, 2018
- Add config option snv_calls to use existing SNV call sets · d580c130
  Tobias Marschall authored 7 years ago
  
  d580c130
- Made R reference (needed in Strand-PhaseR) a config parameter · 701849db
  Sascha Meiers authored 7 years ago
  
  701849db
Dec 04, 2017
- removed class_dir & class_script params · 07479b70
  maryamghr authored 7 years ago
  
  07479b70
Nov 16, 2017
- Integrated Strandphaser into Snakemake pipeline. However, Strandphaser still throws an error · bcd95dd8
  Sascha Meiers authored 7 years ago
  
  bcd95dd8
Oct 30, 2017
- Prepared rules to run SV classification tool, convert its output and plot it · 47125871
  Sascha Meiers authored 7 years ago
  
  47125871
Oct 26, 2017
- new step in the pipeline to prepare input files for calculation of SV propabilities · 216dbac5
  Sascha Meiers authored 7 years ago
  
  216dbac5
- Initial pipeline that does part of the job · 7eb5f6b1
  Sascha Meiers authored 7 years ago
  
  7eb5f6b1