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Created with Raphaël 2.2.026Jul2524212018171311106427Jun262120191817151413125430May292625242322201918added an option for having manually defined segmentsadded an option for having manually defined segmentsadded an option for having manually defined segmentsadded an option for having manually defined segmentsRe-order chromosomesRe-order chromosomesRe-order chromosomesRe-order chromosomesFix to make pipeline work again for multiple samplesFix to make pipeline work again for multiple samplesFix to make pipeline work again for multiple samplesFix to make pipeline work again for multiple samplesMore different parameter combinationsMore different parameter combinationsMore different parameter combinationsMore different parameter combinationsMerge branch 'master' of https://github.com/friendsofstrandseq/pipelineMerge branch 'master' of https://github.com/friendsofstrandseq/pipelineMerge branch 'master' of https://github.com/friendsofstrandseq/pipelineMerge branch 'master' of https://github.com/friendsofstrandseq/pipelinechanged the extension of haplotag-likelihoods file to Rdatachanged the extension of haplotag-likelihoods file to Rdatachanged the extension of haplotag-likelihoods file to Rdatachanged the extension of haplotag-likelihoods file to RdataFixed bug in pdf size limitFixed bug in pdf size limitFixed bug in pdf size limitFixed bug in pdf size limitAdapt Snakefile in response to changes in script for barplots (utils/sv_consistency_barplot.R)Adapt Snakefile in response to changes in script for barplots (utils/sv_consistency_barplot.R)Adapt Snakefile in response to changes in script for barplots (utils/sv_consistency_barplot.R)Adapt Snakefile in response to changes in script for barplots (utils/sv_consistency_barplot.R)sv_consistency_barplot.R plot SV regions sorted by postion & VAFsv_consistency_barplot.R plot SV regions sorted by postion & VAFsv_consistency_barplot.R plot SV regions sorted by postion & VAFsv_consistency_barplot.R plot SV regions sorted by postion & VAFFixed bug in sv_consistency_barplot.RFixed bug in sv_consistency_barplot.RFixed bug in sv_consistency_barplot.RFixed bug in sv_consistency_barplot.R
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