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Created with Raphaël 2.2.04Dec230Nov139872129Oct28271917161211109876529Sep28212019181712112Aug131Jul262524212018171311106427Jun2621Fixing two relevant issues: chrX occurred twice. And default values from Snake.config.json must be overwritten, otherwise they are usedFixing two relevant issues: chrX occurred twice. And default values from Snake.config.json must be overwritten, otherwise they are usedFixing two relevant issues: chrX occurred twice. And default values from Snake.config.json must be overwritten, otherwise they are usedFixing two relevant issues: chrX occurred twice. And default values from Snake.config.json must be overwritten, otherwise they are usedBelongs to prev. commitBelongs to prev. commitBelongs to prev. commitBelongs to prev. commitFixed bug in awk command (introduced by me)Fixed bug in awk command (introduced by me)Fixed bug in awk command (introduced by me)Fixed bug in awk command (introduced by me)Added git + friendsofstrandseq/pipeline to DockerfileAdded git + friendsofstrandseq/pipeline to DockerfileAdded git + friendsofstrandseq/pipeline to DockerfileAdded git + friendsofstrandseq/pipeline to DockerfileFixing bug in awk commandFixing bug in awk commandFixing bug in awk commandFixing bug in awk commandAdded tabix, WhatsHap and Snakemake to the DockerfileAdded tabix, WhatsHap and Snakemake to the DockerfileAdded tabix, WhatsHap and Snakemake to the DockerfileAdded tabix, WhatsHap and Snakemake to the DockerfileFix belonging to prev. commitFix belonging to prev. commitFix belonging to prev. commitFix belonging to prev. commitMoving all awk commands (that use single quotes) to separate files.Moving all awk commands (that use single quotes) to separate files.Moving all awk commands (that use single quotes) to separate files.Moving all awk commands (that use single quotes) to separate files.Fixing a Singularity issue with PYTHONPATH (see https://bitbucket.org/snakemake/snakemake/issues/1031)Fixing a Singularity issue with PYTHONPATH (see https://bitbucket.org/snakemake/snakemake/issues/1031)Fixing a Singularity issue with PYTHONPATH (see https://bitbucket.org/snakemake/snakemake/issues/1031)Fixing a Singularity issue with PYTHONPATH (see https://bitbucket.org/snakemake/snakemake/issues/1031)Moved Dockerfile and included dependencies for Python scriptsMoved Dockerfile and included dependencies for Python scriptsMoved Dockerfile and included dependencies for Python scriptsMoved Dockerfile and included dependencies for Python scripts