Merge branch 'main' into 'submission'

# Conflicts:
#   .gitlab-ci.yml
#   yaml-files/quality-control/fastqc-test.backup

.gitlab-ci.yml

@@ -47,25 +47,5 @@ include:
 # Mapping
 #####################
 
-bowtie2-241cv1-test:
-  extends: .templateTest
-  variables:
-    BASENAME: bowtie2
-    TAG: 241cv1
-    RECIPE_PATH: recipes/mapping/bowtie2
-
-
-bowtie2-245-test:
-  extends: .templateTest
-  variables:
-    BASENAME: bowtie2
-    TAG: 245
-    RECIPE_PATH: recipes/mapping/bowtie2
-
-
-#####################
-## Quality control
-#####################
-
 include:
   - local: "yaml-files/quality-control/fastqc-deploy.yaml"