Merge branch 'submission' of...

Merge branch 'submission' of https://git.embl.de/descoste/singularityhub-emblrome.git into submission

.gitlab-ci.yml

@@ -59,7 +59,7 @@ include:
   - local: "yaml-files/image-analysis/deeplabcut-deploy.yaml"
 
 #####################
-## Quality control
+# Mapping
 #####################
 
 include:

recipes/mapping/bowtie2/Singularity.bowtie2-241cv1

+Bootstrap: docker
+From: biocontainers/bowtie2:v2.4.1_cv1
+
+%runscript
+    echo "Running container biocontainers/bowtie2:v2.4.1_cv1, Bowtie v2.4.1"
+    exec /bin/bash "$@"
+
+%post
+    mkdir /cluster /work /tsd /projects
+
+%labels
+    Author Nicolas Descostes

recipes/mapping/bowtie2/Singularity.bowtie2-245

+Bootstrap: docker
+From: quay.io/biocontainers/bowtie2:2.4.5--py36hfca12d5_2
+
+%runscript
+    echo "Running container quay.io/biocontainers/bowtie2:2.4.5--py36hfca12d5_2, Bowtie v2.4.5"
+    exec /bin/bash "$@"
+
+%post
+    mkdir /cluster /work /tsd /projects
+
+%labels
+    Author Nicolas Descostes