Merge branch 'submission' into 'main'

fastqc-0119cv6-test

See merge request !8

.gitlab-ci.yml

@@ -50,6 +50,15 @@ image:
 #    TAG: 0119cv8
 #    RECIPE_PATH: recipes/quality-control/fastqc/
 
+fastqc-0119cv6-test:
+  extends: .templateTest
+  variables:
+    BASENAME: fastqc
+    TAG: 0119cv6
+    RECIPE_PATH: recipes/quality-control/fastqc/
+
+
+
 #####################
 ## Quality control
 #####################

recipes/quality-control/fastqc/Singularity.fastqc-0119cv6

+Bootstrap: docker
+From: biocontainers/fastqc:v0.11.9_cv6
+
+%runscript
+    echo "Running container biocontainers/fastqc:v0.11.9_cv6, FastQC v0.11.9"
+    exec /bin/bash "$@"
+
+%post
+    mkdir /cluster /work /tsd /projects
+
+%labels
+    Author Nicolas Descostes