Explore projects
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Christopher Randolph Rhodes / model_server
MIT LicenseServer to implement image analysis jobs for online use (e.g. in feedback microscopy), including adapters to ilastik and TensorFlow.
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ALMF / SVLT
MIT LicenseSVLT = Serving Vision to Living Things. A service for on-demand computer vision, targeted at image feedback in microscopy and other life sciences applications.
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Martin Larralde / PyFastANI
MIT LicenseCython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.
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Roman Belousov / dycpm
Creative Commons Attribution 4.0 InternationalDemo of a Poissonian Cellular-Potts model
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Development of Automated Protocols on Zeiss microscopes controlled by ZenBlue
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Bartosz Jan Bartmanski / PoolingScheme
MIT LicenseUpdated -
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CBA / astrocyte-differentiations
MIT LicenseAlina Ritz- Heard Group;
Christian Tischer, Arif Khan - CBA;
Nextflow, python, nuclear cytoplasmic intensity measurements, MoBIE;
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Zimmermann-Kogadeeva Group / NanoCLUST
MIT LicenseUpdated -
Martin Larralde / mini3di
BSD 3-Clause "New" or "Revised" LicenseA NumPy port of the foldseek code for encoding protein structures to 3di.
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Renato Alves / embltilities
GNU General Public License v3.0 onlyUpdated -
Krim Anlas - Trivedi lab;
Nicola Gritti - MIF
Keywords: bioimage analysis, support, MIF, python, matlab, TGMM, gastruloids, TGMM, tracking
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Martin Larralde / peptides.py
GNU General Public License v3.0 onlyPhysicochemical properties and indices for amino-acid sequences (ported from R).
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