Explore projects
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Zaugg Group / SUMseq
MIT LicenseA scalable and reproducible Snakemake workflow for preprocessing SUM-seq data
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CBBCS / webModules
GNU General Public License v2.0 or laterUpdated -
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Franziska Walterspiel - Deo Group, EMBL Heidelberg;
Christian Tischer, Arif Khan - Bioimage Analysis Service Team, EMBL Heidelberg;
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Crocker Group / agrotoxin
MIT LicenseUpdated -
Bartosz Jan Bartmanski / PoolingScheme
MIT LicenseUpdated -
Zaugg Group / BM CHIP MDS
GNU General Public License v2.0 or laterUpdated -
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Kosinski group / alphafold_howto
GNU General Public License v3.0 or laterNotes and SLURM templates for using AlphaFold and related tools on the EMBL HD cluser
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CBA / astrocyte-differentiations
MIT LicenseAlina Ritz- Heard Group;
Christian Tischer, Arif Khan - CBA;
Nextflow, python, nuclear cytoplasmic intensity measurements, MoBIE;
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Renato Alves / embltilities
GNU General Public License v3.0 onlyUpdated -
Krim Anlas - Trivedi lab;
Nicola Gritti - MIF
Keywords: bioimage analysis, support, MIF, python, matlab, TGMM, gastruloids, TGMM, tracking
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Nick Marschlich - Trivedi lab;
Nicola Gritti - MIF
Keywords: bioimage analysis, support, MIF, python, pescoids, ultrack, ome-zarr, napari, tracking
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Alex Kelleher / oc.pyos
GNU General Public License v2.0 or laterUpdated