Cython bindings and Python interface to HMMER3.

A Python client for the high-level DMA API.

A PyTorch implementation of Tree-structured Conditional Random Fields.

PyO3 bindings and Python interface to skani, a method for fast fast genomic identity calculation using sparse chaining.

Python interface to Prodigal, an ORF finder for genomes, progenomes and metagenomes.

NOTE: the project has been moved to https://gitlab.com/gchojnowski/af2plots

GUI and functions for controlling the tracebot and automating microscopes.