Explore projects

Franziska Walterspiel - Deo Group, EMBL Heidelberg;

Christian Tischer, Arif Khan - Bioimage Analysis Service Team, EMBL Heidelberg;

Source code related to the publication "Visualization of loop extrusion by DNA nanoscale tracing in single human cells" by Beckwith, Ødegård-Fougner et.al. DOI: https://doi.org/10.1101/2021.04.12.439407

Interactive visualization of images and image-derived data.

A Python interface to gb-io, a fast GenBank parser and serializer written in Rust.

Extension of AutoMicTools project for testing and running for feedback microscopy experiments with FluoView 3000 confocal microscope

Franziska Walterspiel - Deo Group, EMBL Heidelberg;

Christian Tischer, Arif Khan - Bioimage Analysis Service Team, EMBL Heidelberg;

PyO3 bindings and Python interface to skani, a method for fast fast genomic identity calculation using sparse chaining.

Repository to save all code generated and employed in the Mitotic Exit project

GUI and functions for controlling the tracebot and automating microscopes.