Explore projects

R package to read, register and compare point sets from single molecule localization microscopy.

SVLT = Serving Vision to Living Things. A service for on-demand computer vision, targeted at image feedback in microscopy and other life sciences applications.

Demo of a Poissonian Cellular-Potts model

Rendered at https://grp-bio-it.embl-community.io/template-quarto

Development of Automated Protocols on Zeiss microscopes controlled by ZenBlue

Mahak Bhushan, Francesca Coraggio - Rapti Lab, EMBL Heidelberg; Christian Tischer - Centre for Bioimage Analysis, EMBL Heidelberg; ImageJ Macro, Glia volume measurement

Cuylen Lab

Daniel Heid - Zaugg Group;

Christian Tischer - CBA;

Wound healing analysis, High throughput microscopy

Kenta Imai, Maho Hamasaki - ALMF visitor;

HTM, Screen, Autophagy, CellProfiler

Alina Ritz- Heard Group;

Christian Tischer, Arif Khan - CBA;

Nextflow, python, nuclear cytoplasmic intensity measurements, MoBIE;

A NumPy port of the foldseek code for encoding protein structures to 3di.

An R API to the agrotoxin database using R6 objects.