Explore projects

In this project, we investigated drug impact on gut bacteria by analyzing a large untergeted metabolomics data set and integrating drug-protein interaction networks from STITCH.

galaxy tool to shift read position in a BAM file. Pretty handy for ATAC-seq. The shell script can also be used directly. Resulting BAM is sorted.

SNV calling software

Monterotondo Module 1

Monterotondo Day 2

Liposome microarray (LiMA) analysis suite

A practical example about how to run a MongoDB service on demand in the HPC cluster.

Metagenomics and metatranscriptomics integration

SNV calling software

A INPHARMA data

SNV calling software

Old Python Club project that I ran in my previous life

SNV calling software