Explore projects
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This repository includes the exact commands/instructions in order to set up and run the integrative modelling of ScNPC adapted from Allegretti et al. (2020).
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Laura Bianchi - Ruprecht lab (CRG)
Gopi Shah - MIF
Nicola Gritti - MIF
Keywords: Luxendo, MuVi SPIM, python, cellpose, apoptosis, segmentation, tracking, support, external, bioimage analysis, zebrafish
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Python interface to Prodigal, an ORF finder for genomes, progenomes and metagenomes.
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galaxy tool to shift read position in a BAM file. Pretty handy for ATAC-seq. The shell script can also be used directly. Resulting BAM is sorted.
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Cyro-ET analysis of ribo-decorated mitos in glucose-depleted S. pombe cells
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Deployment configuration for the Bretzel App project.
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