Explore projects
-
Server to implement image analysis jobs for online use (e.g. in feedback microscopy), including adapters to ilastik and TensorFlow.
Updated -
Updated
-
A Python client for the high-level DMA API.
Updated -
-
A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
Updated -
Updated
-
Updated
-
-
A Python interface to gb-io, a fast GenBank parser and serializer written in Rust.
Updated -
Python interface to Prodigal, an ORF finder for genomes, progenomes and metagenomes.
Updated -
PyO3 bindings and Python interface to skani, a method for fast fast genomic identity calculation using sparse chaining.
Updated -
Cython bindings and Python interface to SWORD (Smith Waterman On Reduced Database), a method for fast database search.
Updated -
-
Updated
-
Repository to save all code generated and employed in the Mitotic Exit project
Updated -
Updated
-
Source code related to the publication "Visualization of loop extrusion by DNA nanoscale tracing in single human cells" by Beckwith, Ødegård-Fougner et.al. DOI: https://doi.org/10.1101/2021.04.12.439407
Updated