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EMBL Python User Group

Introduction to Python course materials

Projects with Aastha.

Example client for the SASBDB REST API

Materials for the Software Carpentry workshop taking place at EMBL, Heidelberg, in September 2016

Example client for the SASBDB REST API

EMBL Python User Group

Materials for the Bio-IT "Image Processing with Python" course. Materials have been adapted from those originally forked from Karin Sasaki's GitHub repo.

Teaching material

Material for the EMBL-EBI Predoc Week, November 2017

Introduction to Python course materials

Course materials for image analysis with the scientific Python stack (numpy/scipy/scikit-image/matplotlib)

Code for fluoview automation

Materials for the ALMF/Bio-IT Image Analysis with Python series, running Spring/Summer 2018