Commits · main · Arendt Group / MorF

Aug 17, 2022
- fixed ModelArchive bugs (protein names/models, protein query length); added... · 9d321e6a
  Nikolaos Papadopoulos authored 2 years ago
  
  fixed ModelArchive bugs (protein names/models, protein query length); added AFDB self comparison as per editors' request
  9d321e6a
Aug 02, 2022
- update scripts to new paths, new conda env name · 9e154601
  Niko Papadopoulos authored 2 years ago
  
  9e154601
Aug 01, 2022
- now manual workaround for PDB ID mapping · 5276fe26
  Nikolaos Papadopoulos authored 2 years ago
  
  5276fe26
Jul 29, 2022
- temp saving of AFDB, SWP parquets now possible; minor file structure changes · 8dd17e2e
  Nikolaos Papadopoulos authored 2 years ago
  
  8dd17e2e
Jul 28, 2022
- migrating read/write to scripts and out of notebook · f14f1db2
  Nikolaos Papadopoulos authored 2 years ago
  
  f14f1db2
- Add scripts to reproduce the sequence and profile search based analysis · 62a76855
  Milot Mirdita authored 2 years ago
  
  62a76855
Jun 17, 2022
- was overeager during merging, restoring databases_pdb · d71d75fa
  Nikolaos Papadopoulos authored 2 years ago
  
  d71d75fa
- added countland inspection of single cell; looked at evidence for HGT;... · 0edb1cce
  Nikolaos Papadopoulos authored 2 years ago
  
  added countland inspection of single cell; looked at evidence for HGT; included Fabi's exploration of various protein characteristics in relation to annotation status
  0edb1cce
Jun 15, 2022

- moved to scripts folder
- wrote README
- removed obsolete
- renamed properly

8299e04d

May 12, 2022
- finalized initial I/O notebook · f6ebcc5e
  Nikolaos Papadopoulos authored 2 years ago
  
  f6ebcc5e