Skip to content
Snippets Groups Projects
Commit 6e349b9a authored by Cyril Christophe Daniel Robert Cros's avatar Cyril Christophe Daniel Robert Cros
Browse files

Merge branch 'main' into 'nextflow_work' 

# Conflicts:
#   resources_to_s3_NF/genomes.csv
#   resources_to_s3_NF/jbrowse_script_slug.sh
parents 4484e589 b3629429
No related branches found
No related tags found
1 merge request!6Nextflow work
Pipeline #58639 passed
This commit is part of merge request !6. Comments created here will be created in the context of that merge request.
Hide whitespace changes
Inline Side-by-side
resources_to_s3_NF/jbrowse_script_slug.sh
+ 0
− 1
View file @ 6e349b9a
......@@ -9,7 +9,6 @@ sort -t , -k1,1 |
awk -F, '{ print "jbrowse add-assembly https://s3.embl.de/annelids/"$1"/"$2" \
-n \""$1"\" --displayName \""$3"\"" }'
# Tracks
tail -n +1 tracks.csv | # it should not be tracks
sort -t , -k1,1 -k5,5 -k2,2 |
awk -F, '{ print "jbrowse add-track https://s3.embl.de/annelids/"$1"/"$5"/"$3".vcf.gz \
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment