Commits · fedb66d6e01c004eda605c86d6f068dfb747188c · Zaugg Group / diffTF

Aug 01, 2018
- Version 1.1.1, see changelog for details · f653cb17
  Christian Arnold authored 6 years ago
  
  f653cb17
- Documentation updates, prepare version 1.1.1 (see Changelog) · 03a4b949
  Christian Arnold authored 6 years ago
  
  03a4b949
Jul 27, 2018
- Updated to version 1.1. See changelog · 91811391
  Christian Arnold authored 6 years ago
  
  v1.1
  
  91811391
Jul 25, 2018
- Fixed a corner case in 3.analyzeTF for cases when the number of TFBS is so small that DESeq fails · ae25e374
  Christian Arnold authored 6 years ago
  
  v1.0.1
  
  ae25e374
- Fixed bug in 2.DiffPeaks.R that caused the pipeline to crash in some cases,... · 200f1b25
  Christian Arnold authored 6 years ago
  
  Fixed bug in 2.DiffPeaks.R that caused the pipeline to crash in some cases, thanks to Jonas Ungerback
  200f1b25
Jun 21, 2018
- Fixed an issue with the linear model · 8b106a93
  Christian Arnold authored 6 years ago
  
  8b106a93
Jun 07, 2018
- Documentation improvement + change in DiffPeaks to always run DESEq · 6d2e520e
  Christian Arnold authored 6 years ago
  
  6d2e520e
- Improved diagnostic plots for limma and small sign bug that caused a DESeq /... · 9afc9a95
  Christian Arnold authored 6 years ago
  
  Improved diagnostic plots for limma and small sign bug that caused a DESeq / limma switch in the new version
  9afc9a95
- Major update. Integrated old and new version into one · 21fb4f25
  Christian Arnold authored 6 years ago
  
  21fb4f25
Dec 15, 2017
- Made DESeq analysis compatible for older versions of DESeq that did not set row and column names · f3da2354
  Christian Arnold authored 7 years ago
  
  f3da2354
Dec 13, 2017
- improved macOS compatibility · 43f598b5
  Christian Arnold authored 7 years ago
  
  43f598b5
- various small issues, improved macOS compatibility · 61ae0b39
  Christian Arnold authored 7 years ago
  
  61ae0b39
Dec 11, 2017
- Improved macOS compatibility by removing the -P from the grep command · 20d26c31
  Christian Arnold authored 7 years ago
  
  20d26c31
Dec 06, 2017
- Minor name changes and doc updates · 32ae9b3e
  Christian Arnold authored 7 years ago
  
  32ae9b3e
Dec 04, 2017
- Bugfix for plotting circular plot, documentation test and update for ReadTheDocs · cdd2db3a
  Christian Arnold authored 7 years ago
  
  cdd2db3a
Nov 29, 2017
- Decreased running time and memory footprint for prepareBinning step · 7ca183fa
  Christian Arnold authored 7 years ago
  
  7ca183fa
Nov 28, 2017
- Major Update: featureCounts integration, TFBS naming updates, various other changes · dba60d42
  Christian Arnold authored 7 years ago
  
  dba60d42
Nov 27, 2017
- Minor updates · 1c3e7071
  Christian Arnold authored 7 years ago
  
  1c3e7071
Nov 23, 2017
- Documentation updates · 00df536c
  Christian Arnold authored 7 years ago
  
  00df536c
Nov 22, 2017
- Documentation updates · 7a9114be
  Christian Arnold authored 7 years ago
  
  7a9114be
- Minor updates · 4012a583
  Christian Arnold authored 7 years ago
  
  4012a583
- Minor updates · c91fedc0
  Christian Arnold authored 7 years ago
  
  c91fedc0
Nov 21, 2017
- minor Updates · e998570f
  Christian Arnold authored 7 years ago
  
  e998570f
- General small improvements in relation to relative paths, column names and... · 6f0f6ec8
  Christian Arnold authored 7 years ago
  
  General small improvements in relation to relative paths, column names and config.json parameter checks
  6f0f6ec8
- Fixed minor issues related to the specification of relative paths for the example analysis · 05fedb4a
  Christian Arnold authored 7 years ago
  
  05fedb4a
Nov 20, 2017
- Documentation updates & Bugfix prepareBinning · 421d7b8f
  Christian Arnold authored 7 years ago
  
  421d7b8f
- Cleanup and doc. update · 25ae8957
  Christian Arnold authored 7 years ago
  
  25ae8957
Nov 16, 2017
- major repo update · 2d3e9564
  Christian Arnold authored 7 years ago
  
  2d3e9564
Jun 14, 2017
- working version of the code · 4731a264
  Christian Arnold authored 7 years ago
  
  4731a264