Commits · 2bb2390f39631e1fba997c68b959d0afffb24585 · Bernd Klaus / htm_course_2016

Oct 20, 2016
- extended the interpration section of the first two PCs · 2bb2390f
  Bernd Klaus authored 8 years ago
  
  2bb2390f
- moved explanations to a background section, included interpretation of PCs based on loadings · f27100e5
  Bernd Klaus authored 8 years ago
  
  f27100e5
Oct 19, 2016
- updated tutorial with the new data · d1e3cc80
  Bernd Klaus authored 8 years ago
  
  d1e3cc80
- data import for the new data does not work, A. please check ... · ff14cec1
  Bernd Klaus authored 8 years ago
  
  ff14cec1
- improved explanations in PCA section · d683df40
  Bernd Klaus authored 8 years ago
  
  d683df40
Oct 13, 2016
- improved explanations in PCA section · 0a5de90b
  Bernd Klaus authored 8 years ago
  
  0a5de90b
- added heatmap section, plotted heatmap with ggplot2 · 74275699
  Bernd Klaus authored 8 years ago
  
  74275699
- added section on PCA analysis, group-apply-combine and data transformations · 2dc0136a
  Bernd Klaus authored 8 years ago
  
  2dc0136a
Oct 10, 2016
- added background on PCA and ggplot2 · 69a79794
  Bernd Klaus authored 8 years ago
  
  69a79794
- added section on tidy data and reshaping between long and wide format · f77de74d
  Bernd Klaus authored 8 years ago
  
  f77de74d
- expanded section on data import from ch5 files · cf97a873
  Bernd Klaus authored 8 years ago
  
  cf97a873
- Added infrastructure for references, Added short introductory summary of the lab · c8735773
  Bernd Klaus authored 8 years ago
  
  c8735773
Oct 06, 2016
- Optionally install/update 'cellh5' · 45025a9a
  Andrzej Oles authored 8 years ago
  
  45025a9a
- Added plate heatmap of apoptotic cells, created RData file for the raw data · 294d1787
  Bernd Klaus authored 8 years ago
  
  294d1787
Oct 05, 2016
- Don't need to define 'c5read' · edafccd5
  Andrzej Oles authored 8 years ago
  
  edafccd5
- Install patched cellh5 R package · 9ca189bd
  Andrzej Oles authored 8 years ago
  
  9ca189bd
- added code to read ch5 files and create PCA · 4c6e2edb
  Mike Smith authored 8 years ago
  
  4c6e2edb
Oct 04, 2016

Initial commit of the tutorial Rmd · fc8bd999

Bernd Klaus authored 8 years ago

The file draft Rmd contains an outline of the envisioned content of the practical.
I included the html file as well for convenience.

fc8bd999