Commits · 9ca8db04e70b507b5bfac0e31822af5a1966daaa · Kimberly Isobel Meechan / platy-browser-data · GitLab

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Jul 06, 2019
- Add scripts to copy tables · 72dfb368
  Constantin Pape authored 5 years ago
  
  72dfb368
Jun 30, 2019
- Implement anchor correction · 1c8e755e
  Constantin Pape authored 5 years ago
  
  1c8e755e
- Fix several issues in update_platy_browser · 886241a6
  Constantin Pape authored 5 years ago
  
  886241a6
Jun 29, 2019
- Restrict numpy threads for morphology extraction · 33bcbdb4
  Constantin Pape authored 5 years ago
  
  33bcbdb4
Jun 27, 2019
- Add segmented prospr regions to region attributes and adapt muscle mapping · 4816b25e
  Constantin Pape authored 5 years ago
  
  4816b25e
- Add segmented prospr regions to initial version and copy scripts · 07f762e0
  Constantin Pape authored 5 years ago
  
  07f762e0
Jun 21, 2019
- Fix name issues in attribute scripts · ce5d435b
  Constantin Pape authored 5 years ago
  
  ce5d435b
- Add bookmarks.json to misc data · 635f6c74
  Constantin Pape authored 5 years ago
  
  635f6c74
- Finish file renaming and update scripts · 8a1e833c
  Constantin Pape authored 5 years ago
  
  8a1e833c
- Implemnt file renaming WIP · 423233da
  Constantin Pape authored 5 years ago
  
  423233da
- Add bigdataserver file · d8fcd34f
  Constantin Pape authored 5 years ago
  
  d8fcd34f
Jun 20, 2019
- Add all MED files · a37678aa
  Constantin Pape authored 5 years ago
  
  a37678aa
- Add cell region script and table · 4202df6b
  Constantin Pape authored 5 years ago
  
  4202df6b
Jun 13, 2019
- Skip invalid labels in morphology computation instead of placeholder features · 408c9dad
  Constantin Pape authored 5 years ago
  
  408c9dad
- Wrap morphology calculation in cluster task; parallelize it · 224f2ea2
  Constantin Pape authored 5 years ago
  
  224f2ea2
Jun 12, 2019
- Wrap gene expression in cluster task; vectorize and parallelize computation · 2aa06f51
  Constantin Pape authored 5 years ago
  
  2aa06f51
- Simplify cell property calculation for gene attributes · 7ddc3228
  Constantin Pape authored 5 years ago
  
  7ddc3228
Jun 11, 2019
- Add test for morphology attributes · eddbc834
  Constantin Pape authored 5 years ago
  
  eddbc834
- Refactor morphology functions and simplify bounding box calculation · fe2a9c01
  Constantin Pape authored 5 years ago
  
  fe2a9c01
- Fix bug in base attributes · 560d3cea
  Constantin Pape authored 5 years ago
  
  560d3cea
- Add test for base attributes · 5e111e30
  Constantin Pape authored 5 years ago
  
  5e111e30
- PEP8 · 3682f1fe
  Constantin Pape authored 5 years ago
  
  3682f1fe
- Add morphology script · fd712ab5
  Kimberly Isobel Meechan authored 5 years ago
  
  fd712ab5
Jun 07, 2019
- Add xml functionality · a79091e1
  Constantin Pape authored 5 years ago
  
  a79091e1
- Update gene script and call it for cell master table · 693f7a25
  Constantin Pape authored 5 years ago
  
  693f7a25
- PEP8 · c08565cb
  Constantin Pape authored 5 years ago
  
  c08565cb
- cleaned up · 2199c143
  Valentyna Zinchenko authored 5 years ago
  
  2199c143
- script to write gene table · b75430bc
  Valentyna Zinchenko authored 5 years ago
  
  b75430bc
Jun 05, 2019
- Add script for object mapping tables · 80c1e89b
  Constantin Pape authored 5 years ago
  
  80c1e89b
- Implement default table generation · b888ac80
  Constantin Pape authored 5 years ago
  
  b888ac80
Jun 04, 2019
- Implement segmentation export · 81737ef2
  Constantin Pape authored 5 years ago
  
  81737ef2
- Continue implementation for initial data version · 1f8a9249
  Constantin Pape authored 5 years ago
  
  1f8a9249
- Work on skeleton implementation for update_platy_browser · c44a8fea
  Constantin Pape authored 5 years ago
  
  c44a8fea
Jun 03, 2019
- Make structure for segmentation scripts · 18a4b9a1
  Constantin Pape authored 5 years ago
  
  18a4b9a1
- Implement scripts for base attributes and bdv export · 52f990e6
  Constantin Pape authored 5 years ago
  
  52f990e6