Commits · 790226c1fdb1d7bc09ad238010afc42eec73cc2a · Christian Tischer / platy-browser-data

Feb 07, 2020
- Clean up intensity correction workflow · 0701f5ec
  Constantin Pape authored 5 years ago
  
  0701f5ec
Feb 05, 2020
- Rename python module from scripts to mmpb · 33f04394
  Constantin Pape authored 5 years ago
  
  33f04394
- Add script for chunk estimates · 3f682f72
  Constantin Pape authored 5 years ago
  
  3f682f72
Feb 03, 2020
- Add nephridia segmentation and nephridia row to regions table · 213cc044
  Constantin Pape authored 5 years ago
  
  213cc044
Jan 21, 2020
- Add midgut column to region table · f19af3e3
  Constantin Pape authored 5 years ago
  
  f19af3e3
- Add midgut segmentation · 509c5b7f
  Constantin Pape authored 5 years ago
  
  509c5b7f
Nov 25, 2019
- Update ganglia table · 80eb0c64
  Constantin Pape authored 5 years ago
  
  80eb0c64
- Update ganglion table with muscle ids and rest of head · f656ffab
  Constantin Pape authored 5 years ago
  
  f656ffab
- Add initial ganglia segmentation to version 0.6.5 · 43ac1b6e
  Constantin Pape authored 5 years ago
  
  43ac1b6e
Nov 08, 2019
- Finish (initial) implementation of segmentation correction and validation. · 0e93379d
  Constantin Pape authored 5 years ago
  
  0e93379d
Nov 07, 2019
- Implement preliminary cilia analysis · 649e08a0
  Constantin Pape authored 5 years ago
  
  649e08a0
- Update patch version · b8ad90b5
  Constantin Pape authored 5 years ago
  
  0.6.2
  
  b8ad90b5
Nov 04, 2019
- Fix issues with segmentation attributes derived from virtual cells · b60a3891
  Constantin Pape authored 5 years ago
  
  b60a3891
Oct 17, 2019
- Update cell seg evaluation · 54026e2f
  Constantin Pape authored 5 years ago
  
  54026e2f
- Update validation code · ba81ccf9
  Constantin Pape authored 5 years ago
  
  ba81ccf9
- Update intensity correction scripts · cbe8a5ae
  Constantin Pape authored 5 years ago
  
  cbe8a5ae
- Add check for validation data · d5656cde
  Constantin Pape authored 5 years ago
  
  d5656cde
Oct 04, 2019
- Add scripts for masking extrapolated cells and nuclei · 38f96f46
  Constantin Pape authored 5 years ago
  
  38f96f46
Oct 03, 2019
- Register virtual-cells with prospr · a6765622
  Constantin Pape authored 5 years ago
  
  a6765622
Oct 02, 2019
- Update scripts for intensity correction and downscaling · 38117e7e
  Constantin Pape authored 5 years ago
  
  38117e7e
Oct 01, 2019
- Implement workflow for raw data intensity correction · 12e90e01
  Constantin Pape authored 5 years ago
  
  12e90e01
Sep 11, 2019
- Add scripts for initial nephridia analysis · 5087199e
  Constantin Pape authored 5 years ago
  
  5087199e
Sep 05, 2019
- Minor fixes · abf0dee0
  Constantin Pape authored 5 years ago
  
  abf0dee0
- Update neuron trace extraction · 7ef3a57b
  Constantin Pape authored 5 years ago
  
  7ef3a57b
Sep 04, 2019
- Finish implementation of cilia len and diameter · 6ce78eb5
  Constantin Pape authored 5 years ago
  
  6ce78eb5
- Update cilia attributes WIP · e4dbeb4d
  Constantin Pape authored 5 years ago
  
  e4dbeb4d
Sep 03, 2019
- Check cilia len computation · 1c89101f
  Constantin Pape authored 5 years ago
  
  1c89101f
Aug 27, 2019
- Add volume measurements · f6e2e3ce
  Constantin Pape authored 5 years ago
  
  f6e2e3ce
Aug 23, 2019
- Add gene expression computation · a6f91df4
  Constantin Pape authored 5 years ago
  
  a6f91df4