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Commit ff60b9fd authored by Tobias Marschall's avatar Tobias Marschall
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Fix to make pipeline work again for multiple samples

parent 2697eb23
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......@@ -728,7 +728,7 @@ rule create_haplotag_table:
rule merge_haplotag_tables:
input:
tsvs=lambda wc: ['haplotag/table/{}/by-cell/haplotag-counts.{}.{}.{}.tsv'.format(sample,cell,wc.windows,wc.bpdens) for cell in BAM_PER_SAMPLE[wc.sample]],
tsvs=lambda wc: ['haplotag/table/{}/by-cell/haplotag-counts.{}.{}.{}.tsv'.format(wc.sample,cell,wc.windows,wc.bpdens) for cell in BAM_PER_SAMPLE[wc.sample]],
output:
tsv='haplotag/table/{sample}/full/haplotag-counts.{windows}.{bpdens}.tsv'
shell:
......
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